Progress

On this page, I will be keeping track of my general progress in this project.

May 12 – 13, 2008

  • Familiarized myself with the Cytoscape program (what it does, what it is capable of doing, etc.)

May 16, 2008

  • Started reading Graph Drawing: Algorithms for Visualization of Graphs – by Ioannis G. Tollis, Giuseppe Di Battista, Peter Eades, Roberto Tamassia

May 17, 2008

  • Managed to fix the problem with running the Cytoscape source code on Eclipse

May 22, 2008

  • Continued setting up my programming environment on Eclipse
  • Learning about Ant in Java

May 28, 2008

  • Managed to set up Eclipse so that plugins can be debugged in it (as a separate project)
  • Started Subproject 1

June 4, 2008

  • Completed Subproject 1

June 5, 2008

  • Extended Subproject 1 so that it supports graphs with nodes of varying sizes
  • Started Subproject 2

June 24, 2008

  • Completed Subproject 2
  • Started learning graph drawing algorithms
  • Preparing for my next demo

June 28, 2008

  • Started working on the automatic label layout plugin

July 30, 2008

  • Making refinements with the final Automatic Label Plugin
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